My experience on submitting the first Bioconductor package
I am sharing with you here what I have learned and experienced during developing my first R package - PhyloProfile and after successfully submitting it to Bioconductor repository.
Getting started with Docker - Creating an R Shiny app container as an use-case
Docking or containerization is a new method of distribute a software/tool. Beside providing only the source code for installing, we give the users the so-called container, which contains the whole environment to run the program, including the tool and its dependencies with the exact version and all the needed configurations. By delivering such a “container”, users are always able to “reuse” the tool and reproduce the results as we did.
Getting started with git and GitHub
Table of Contents
Working with Data frame
Table of Contents
- Rename a data frame
- Convert a list into one COLUMN of a data frame
- Convert a list into one ROW of a data frame
- Remove column(s) from a data frame
- Remove rows that contain a specific value from a data frame
- Remove unused levels from factor
- Replace values of one column by another column
- Remove rows that contain NA value
- Reorder levels of factor
My first contribution to an open source software package
Data frame
A data frame in R can be used to store a table (two dimension) data structure. Unlike matrix, different columns of a data frame can have different data type (like numeric, character, factor, etc.)
Table of Contents
PhyloProfile, (R)Tool for phylogenetic profiling
How I met R
